I suspect each piece of paper, if examined with a good enough camera, has a unique fingerprint, like a snowflake, and perhaps this could be used in the future for an "Isomer Addressed Filesystem". In other words, all pieces of paper ship with a UUID already, woven into their atoms.
The goal has always been to move away from the dots, you can see this in the progress report: https://dynamicland.org/2019/Progress_report/
That said, and this is purely my opinion, the system works well enough as it is, and there is so much fun stuff to build on top of what works, that it's hard to prioritize a better object recognition system over the myriad of other interesting things to be done.
https://en.wikipedia.org/wiki/DARPA_Shredder_Challenge_2011
Fun fact: Otavio Good, who led the winning team, learned about the printer dots on this very site. As I recall, he said that the dots were like a map that let them reconstruct the shredded documents.
Thank you for reminding me, and others, how immediate and obvious success can be.