It works for the same reason locks on houses work against cops or criminals, despite the existence of lockpicking and locksmiths. There are various layers of physical security, and while no layer can prevent an attack absolutely they each increase the cost of an attack.

The system is only as secure as it's weakest layer.

So in a mixed information/physical system like a smartphone why should we allow the weak point to be the information system? To improve the information system we need only to rewrite the software, so the per-unit cost is nothing in the large.

The offenses of a regime at its apex would've led to it being stopped had they started out that way, but they didn't.

What you've hit on is the basic problem of treating privacy as a means to an end though: no level of it protects you from fascism, but it is a means by which fascism can be opposed - in many cases at personal cost to yourself.

In theory I have no secrets, and the contents of my phone or life if public would be of no consequence to me. In practice, when the regime starts flustering itself that I have no secrets for them to reveal the hopefully people will oppose it - or I get a decent warning that it's time to bail.