Although your general sentiment is something I agree with(if it's going to be painful do it and get it over with), I don't believe anybody knew or could've guessed what the reaction of the ecosystem would be.
Your last point about being able to change internals more freely is also great in theory but very difficult(if not impossible) to achieve in practice.
I don't know. Having maintained some small projects that were free and open source, I saw the hostility and entitlement that can come from that position. And those projects were a spec of dust next to something like Python. So I think the core team is doing the best they can. It was always going to be damned if you do, damned if you don't.
Slight tangent: if Claude can decimate IBM stock price by migrating off Cobol for cheap, surely we can do Python 2 to 3 now, too?
About the internals: we sort of missed an opportunity there, but back then there also didn't quite know what they were doing (or at least we have better ideas of what's useful today). And making the step from 2 to 3 even bigger might have been a bad idea?